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- FUGUE . . . 8 matches
- ...<<FslToolContents>>
= Research Overview =
FUGUE is, most generally, a set of tools for EPI distortion correction. It also refers to a specific command line tool `fugue`.
* Fun...
- FEAT/UserGuide . . . 6 matches
- ... you run FEAT and usually require site/scanner/sequence specific processing. See the [[FUGUE/Guide#Making_Fieldmap_Images_for_FEAT|FUGUE]] documentation for more information on cr...
- FLIRT/UserGuide . . . 4 matches
- ...distortion-correction. For this it requires extra images (in the format as given by [[FUGUE/Guide#Making_Fieldmap_Images_for_FEAT|fsl_prepare_fieldmap]] ) as well as extra inform...
- WhatsNew . . . 10 matches
- ...on, the old vertex analysis method, with surfaces, remains available.
* Fieldmaps - [[FUGUE/Guide#SIEMENS_data|fsl_prepare_fieldmap]] is a tool designed to make the initial proce...
- FEAT/StepByStep1 . . . 4 matches
- ...
<<FslToolContents>>
= Step by Step Guide =
== First-Level FMRI ==
* [[InitialProcessing|Initial Processing]]
* Run [[BET/StepByStep|brain extraction]] on the structural im...