#This is a template for a FSL tool section # Create subpages as ToolName/blah # Minimum required subpages are: # UserGuide # Faq # Theory # You should also create a ToolName/Contents which contains nothing but the names of the subpages in the order you wish them to appear in the menu, one per line # eg: #UserGuide #Faq #Theory # Do not include the top level page # Attach an image to this page and change the attachment line at the start to show it on the right of the page. # Remember to add this page to the appropriate category <> {{attachment:tirl-logo.png|align="left"|height=50px}} = Tensor Image Registration Library v2.1 = TIRL is a modular general-purpose image registration framework for Python 3 with prebaked routines for 2D-to-3D histology-to-MRI registration. {{{#!wiki caution '''BETA RELEASE''' TIRL is currently considered to be in testing. Results should be interpreted with caution, and you should always look at the output. Your correspondence about any encountered issues is highly appreciated. }}} = Referencing = If you use TIRL in your research, please make sure that you reference the following: {{{#!wiki references I.N. Huszar, M. Pallebage-Gamarallage, S. Foxley, B.C. Tendler, A. Leonte, M. Hiemstra, J. Mollink, A. Smart, S. Bangerter-Christensen, H. Brooks, M.R. Turner, O. Ansorge, K.L. Miller, M. Jenkinson; ''Tensor Image Registration Library: Automated Non-Linear Registration of Sparsely Sampled Histological Specimens to Post-Mortem MRI of the Whole Human Brain''; bioRxiv 849570; doi: [[https://doi.org/10.1101/849570|10.1101/849570]] }}}