Index

SHELL SCRIPTING --- INTRODUCTION --- [ Scripting Practical ] --- DATA MANAGEMENT --- BASIC SHELL SCRIPT --- [ The First Script - Applying BET ] --- USEFUL SHELL SCRIPT TEMPLATE --- SCRIPTING TIPS --- BASIC SCRIPTING CONCEPTS --- WILDMASKS --- ECHO --- [ Echo and Wildmasks ] --- VARIABLES --- BRACES --- COMMAND LINE ARGUMENTS --- [ Adding Command Line Arguments ] --- SINGLE QUOTES AND BACKSLASH --- DOUBLE QUOTES --- BACKQUOTES --- [ Mixing Commands and Variables ] --- PIPE --- FILE REDIRECTION --- HANDY SHELL UTILITIES --- TEST --- IF --- [ Testing for Valid Arguments ] --- FOR --- [ Processing Image Batches ] --- BC --- [ Calculating Voxel Volume ] --- WHILE --- [ Lightbox Viewer ] --- GREP --- AWK --- [ Processing a Stimulus File ] --- SED --- FUNCTIONS --- REGULAR EXPRESSIONS --- REGULAR EXPRESSIONS --- [ Changing Files and Filenames ] --- FSL COMMANDS --- FURTHER COMMANDS --- [ Creating A Movie ] --- LEARNING MORE

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