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| = FSL WITH OTHER SOFTWARE = |
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| On the [[https://www.fmrib.ox.ac.uk/phpwiki/index.php/FSL%20Plugins|FSL Plugins Wiki]] we provide a list of plugins, extensions, toolboxes, templates and atlases that have been created by other groups and are relevant to users of FSL. FreeSurfer - Cortical flattening and modelling |
On the [[Plugins|FSL Plugins Wiki]] we provide a list of plugins, extensions, toolboxes, templates and atlases that have been created by other groups and are relevant to users of FSL. |
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| [[http://www.fmrib.ox.ac.uk/fsl/freesurfer/index.html|FreeSurfer]] is a set of tools for reconstruction/flattening of the brain's cortical surface and subcortical segmentation/registration, produced at MGH, Boston. It can, for example, be used to overlay functional data onto the inflated/flattened cortical surface, or carry out multi-subject FMRI statistics on the cortical surface. We have worked together with MGH to make interoperation of FSL and FreeSurfer as easy as possible. NITRC - Neuroimaging software resource |
---- == FreeSurfer - Cortical flattening and modelling == [[http://surfer.nmr.mgh.harvard.edu|FreeSurfer]] is a set of tools for reconstruction/flattening of the brain's cortical surface and subcortical segmentation/registration, produced at MGH, Boston. It can, for example, be used to overlay functional data onto the inflated/flattened cortical surface, or carry out multi-subject FMRI statistics on the cortical surface. We have worked together with MGH to make [[FreeSurfer|interoperation of FSL and FreeSurfer]] as easy as possible. ---- == Other neuroimaging software == |
FSL Plugins Wiki
On the FSL Plugins Wiki we provide a list of plugins, extensions, toolboxes, templates and atlases that have been created by other groups and are relevant to users of FSL.
FreeSurfer - Cortical flattening and modelling
FreeSurfer is a set of tools for reconstruction/flattening of the brain's cortical surface and subcortical segmentation/registration, produced at MGH, Boston. It can, for example, be used to overlay functional data onto the inflated/flattened cortical surface, or carry out multi-subject FMRI statistics on the cortical surface. We have worked together with MGH to make interoperation of FSL and FreeSurfer as easy as possible.
Other neuroimaging software
FSL is just one of many software packages listed at the NITRC neuroimaging tools resource.